IUPAC-CODATA
Task Group on Standard Physico-Chemical Data Formats
(IUCOSPED)
Open Meeting
Paris, April 11, 14H00-17H00
A brief description of the objectives of the IUCOSPED Task Group and of the IUCODIX/DataExplorer Project is given in the attached file: poster_hvk.doc
For more
details please visit the IUPAC Web Site: http://www.iupac.org/projects/1999/024_1_99.html
and the DataExplorer Web Site:
http://www.fiz-karlsruhe.de/dataexplorer
ID: everyone
Password: sesame
The first IUCOSPED Meeting was held in Berlin (10-11 August 1999) in the frame of the 40th IUPAC General Assembly.
This is
the first Open IUCOSPED Meeting. The purpose is to show to participants
of the Workshop on Halogenated Hydrocarbons the progress that
has been made during the 20 months since the Berlin meeting and to
exchange views on the future development and implementation of the project.
In particular, this meeting aims to stimulate discussions around
one of the specific questions addressed by the Workshop Panel concerning
data exchange and databases:
http://www-cenerg.ensmp.fr/iupac_paris.wshop/html/discthemes.html
the use of standard electronic data files (SELF) developed by IUCOSPED
and their accessibility via Internet servers.
Each SELF consists of a header ("bibliographic SELF") with four identifiers:
1. Publisher and Publication identifier
2. Reference identifier
3. Property identifier
4. Chemical system identifier
and the body with the numerical values,
Example of header:
D0002-001X[1998].T015
P0001-0014(1998)36;97;100;0
CHSY3115
39227-58-2
The identifiers are universal,
user language- and user community-insensitive,
codes.
Each identifier is
associated to user language- and user community-specific
descriptors (explaining the meaning of the codes).
In the present preliminary
stage of development, default descriptors (explanatory
text, nomenclature and terminology, etc. in English) are
used in DataExplorer.
Publisher and Publication
identifiers and descriptors are assigned by
DataExplorer and the Publishers.
The assignment of Property
identifiers and default descriptors is,par
excellence, the job of IUCOSPED.
Reference identifiers (including the Original source identifiers) and the corresponding descriptors (source name, authors, title, etc.) should be developed in cooperation with such organizations like CAS, DOI and ISSN. At present ad hoc solutions are applied in DataExplorer.
The assignment of Chemical
system identifiers is a complex task. At present
the CAS RN is used for well defined substances in single or multicomponent
systems. Adopting IChI (IUPAC Chemical Identifier) labels,
instead of CAS RN, is an option to be examined when the IChIs are
defined. Anyway, the reporting of numerical data requires the precise
identification of the state of the system. Systems in a stable
fluid phase (single- or multiphase, gas or liquid or critical or
supercritical states) may be identified through the Property identifier.
There is a need of identifying metastable fluids, such as materials
in the vitreous state, addition compounds, nonstoichiometric
compounds, polymers, etc.
Polymorphic forms
of pure substances have sometimes, but not always, distinct
CAS RNs. There is a need of identifying all the possible stable
or metastable crystalline phases in single- or multicomponent systems.
The IUCr would be the best partner in developing such identifiers
and, in fact, a IUCr Working Group on Phase Transition Nomenclature
is active in this field.
Summarizing, a close cooperation
of IUCOSPED with organizations such as
CAS, DOI, ISSN and IUCr would be highly desirable and likely to be
of mutual interest for all the parties.
The numerical data are actually presented in SELF using a format similar, but not identical, to the format of the 1291 files published in the ELDATA Journal (see Attachment 1. Display Procedure from DataExplorer).
AGENDA OF MEETING
The Agenda of the Meeting
consists of two Sessions.
Session I is devoted to the on-line demonstration of DataExplorer with tentative SELFs, and ad hoc bibliographic identifiers.
This is followed by a lecture on Digital Oject Identifiers (DOI). The DOI is an identification system for intellectual property in the digital environment developed by IDF, the International DOI Foundation. Academic Press, Blackwell, Elsevier, John Wiley, Springer, American Chemical Society and many other are IDF members.
This is followed by a lecture
on XML and CML.
The eXtensible Markup
Language (XML) is an emerging data exchange Internet
standard. No one of the data publishers uses it yet, but
there is an increasing interest in it. Therefore, the conversion of
IUCOSPED SELFs into an XML format is one of the current IUCOSPED activities
and the first steps will be illustrated in this lecture.
CML (Chemical Markup
Language) is a new approach to managing molecular
information using recently developed Internet tools such as
XML and Java. It has a large scope as it covers disciplines from
macromolecular sequences to inorganic molecules and quantum chemistry.
Session II is a free forum
where participants are invited to discuss the
presentation of physico-chemical properties they are currently generating
by experiment or theory (see Attachment 2. Procedure of Presentation
of Property Types). A few property types with reporters are
already listed.
The characterization
and identification of some chemical systems is
not easy, especially when numerical data are reported . Several classes
of such systems investigated by Workshop participants are listed
in Attachment 3.
In the same Attachment
3 are listed most of the property types investigated
by Workshop participants, as far as they could be identified
from the submitted abstracts. For a few of them SELFs are
already available under dataExplorer, in which case the property
type identifiers are given (see Attachment 1. Display Procedure
from DataExplorer).
Session I
1. DataExplorer as a Portal to Data Sources
Demonstration from Internet, FIZ Karlsruhe.2. Bibliographic SELF Identifiers
Reporter: Henry V. Kehiaian3. Properties (examples of existing SELFs and Descriptors prepared in collaboration with the DCP-Praha, GTCRAS-Moscow, TRC-Texas (ICSU Grant partners), DECHEMA and ELDATA.
4. Digital Object Identifiers (DOI)
Reporter: Norman Paskin (*)(invited)5. XML, CML and SELF for high-quality chemical data exchange
Reporter: Peter Murray-Rust (**)(invited)
Session II
6. New Property Types
6.1. Virial Coefficients
Reporter: J. H. Dymond (invited)
6.2. Solubility of Gases and derived Properties
Reporter: Emmerich Wilhelm
6.3. High Pressure PVT data
Reporter: D. Richon
6.4. Enthalpies of Combustion
Reporter: T. S. Papina (invited)
6.5. Thermal Functions for Pure Substances
Reporter: O. V. Dorofeeva
(invited)
etc. etc.
(*) Director, International
Digital Object Identifiers Foundation,
Oxford, UK
(**) Director, Virtual
School of Molecular Sciences,University
of Nottingham, UK
ATTACHMENTS
Attachment 1. Display Procedure
from DataExplorer (examples)
See above URL, ID and Password.
Click Direct Access
to DataExplorer.
Get Help by clicking
on the access way you want to use (most
are already working).
Examples:
DIRECT ACCESS
Type * (an asterisk)
in the SELF Filename box and click the
Expand button. Be patient. You display the Filenames of
all the 3516 Data Files actually in DataExplorer. You can
display the bibliographic information of any file by
clicking the Filename and then the SEARCH button.
By clicking on the Identifier of the Property Type you display
the full Descriptor.
By clicking on the Filename you display the SELF.
Click the RESET button.
SELECTIVE ACCESS
Type * (an asterisk)
in the Property Code box and click the
Expand button. You display the Identifiers and Short Descriptors
of all the 28 Property Types actually in DataExplorer.
Type the full of
partial identifier followed by * (an asterisk) in the
Property Code box and click the Expand button. You display the
Identifiers and Short Descriptors of all the Property Types actually
in DataExplorer matching the typed characters.
Click the Identifier
of a Property Type and then the SEARCH button
(at the bottom of the page). You display the bibliographic
information of all the SELFs corresponding to
the selected Property Type. By clicking on the Identifier of
the Property Type you display the full Descriptor.
By clicking on the
Filename you display the SELF.
Return and click
the RESET button (at the bottom of the page).
N.B. The Descriptors of CHSY3115 and CHYG1115 are not yet fully reproduced. You may note several other errors. They will be corrected soon.
Attachment 2. Procedure of Presentation of Property Types
The objective of IUCOSPED
in 2001-2002 is to propose standard formats
for at least 100 Property Types (thermodynamic, transport, reaction,
kinetic, electrical, optical etc.) for pure substances and
materials, mixtures, solutions, in various states of aggregation.
Take it easy ! Consider
properties you are currently measuring or
calculating. The best is to take examples from your own publications.
The essential task
is to define "Property Types" similar to the existing
ones under DataExplorer, to list all the involved
Physical Quantities
with their attributes (Parameter, Independent or
Dependent Variables) and specify the Method.
Do not worry about the Identifiers (Codes) of the Property Types.
The most important is to
give the Short and the Detailed Descriptors
for each Property Type and to select Keywords.
A single example of numerical
data file is sufficient (not necessarily
all the data points). Put it in a SELF-like format or
leave it as published (reprints are welcome).
Do not worry about
the Identifiers (Codes), these will be assigned
later.
The Property Type Identifiers
and Short Descriptors are:
#
[TVLT1111]
Single-component
stable liquid
[.eta./Pa s] = [Y1]
viscosity at variable temperature [T/K] = [X1]
Direct low-pressure
measurement of .eta. at variable T
#
[TVLT1117]
Single-component
stable liquid
[.eta./Pa s] = [Y1]
viscosity at variable temperature [T/K] = [X1]
Selected low-pressure
.eta. data at variable T
#
[TVLT1121]
Single-component
stable liquid
[.eta./Pa s] = [Y1]
viscosity at variable pressure [P/Pa] = [X1]
and constant temperature
[T/K] = [P1]
Direct measurement
of .eta. at variable P and constant T
#
[TVLT1131]
Single-component
stable liquid
[.eta./Pa s] = [Y1]
viscosity at variable temperature [T/K] = [X1] and
pressure [P/Pa] = [X2]
Direct measurement
of .eta. at variable T and P
#
N.B. "stable" means
here "not undercooled" liquid. Maybe we should not
make a distinction and write "stable or metastable". Eventually put
the data in two blocks, one for the stable region and another for
the metastable.
SELFs, detailed descriptors (Memos), and the display of SELF in the ELDATA Journal (ELDJ) style are also shown in the Attachments TVLT1111.ID, TVLT1117.ID, TVLT1121.ID, and TVLT1131.ID
Attachment 3. Complex Chemical
Sytems and Property Types investigated
by Workshop participants (SELF Property Identifiers given
when available under DataExplorer)
Addition compounds
Avramenko
Polymers
Fernandez
Lubricant oils
Fernandez
Marsh
Mazur
Surfactants, micellar
systems
Fisicaro
PHASE EQUILIBRIUM PROPERTIES
| Pure substances | ||
| Critical temperature of pure substances | EPTL0011 | EPTL0017 |
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| Critical pressure of pure substances | EPTL0021 | EPTL0027 |
| Triple point temperatures of pure substances | ||
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| Solid-solid phase transition temperatures | ||
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| Vapor pressure of pure liquids | EPTL1111 | |
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Boiling temperature of pure liquids |
EPTL1211 | |
| Normal boiling temperature of pure liquids | EPTL1221 | |
| Sublimation pressure of pure solids | EPTS1111 | EPTS1112 |
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EPTS2111 | |
| Temperature of fusion of pure solids | ETSL1111 | |
| Equation of state of pure fluids (correlated data) | ||
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| Mixtures and solutions | ||
| Vapor-liquid equilibria in binary systems | EVLM1111 | EVLM1121 |
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EVLM1211 | EVLM1221 |
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| Azeotropic data | EVLM1532 | |
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Vapor-liquid-liquid equilibria in ternary systems |
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| Solubility of gases in liquids | ||
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| Liquid-liquid equilibria | ||
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| Solubility of liquids in liquids | ||
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| Solubility of solids in liquids | ||
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| High-pressure fluid phase equilibria | ||
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| Equation of state of pure fluids | ||
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CALORIMETRIC
PROPERTIES
| Pure substances | ||
| Heat capacities of pure liquids | CPLS1211 | CPLS3241 |
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| Enthalpies of vaporization of pure liquids | ||
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| Enthalpies of fusion of pure substances | HTSL1111 | |
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| Enthalpies of sublimation of pure solids | ||
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| Enthalpies of solid-solid transitions | ||
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| Thermal functions of pure substances | CHSY3115 | CHYG1115 |
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| Enthalpies of combustion | ||
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| Mixtures and solutions | ||
| Excess enthalpies of liquid mixtures | ||
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| Enthalpies of dilution in liquid solutions | ||
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| Heat capacities of fluid mixtures | ||
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| Excess Gibbs energies | ||
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| Activity coefficients at infinite dilution | GEMS1311 | |
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| Solvation functions | ||
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SURFACE PROPERTIES
| Surface tension | ||
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VOLUMETRIC PROPERTIES
| Pure substances | ||
| Critical pressure of pure substances | VPTL0011 | VPTL0017 |
| Saturation pure liquid densities | VPTL1141 | |
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| P.rho.T for pure liquids | VPTL1111 | VPTL1121 |
| VPTL1131 | ||
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| Ultrasound velocity for pure liquids | ||
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| Mixtures and solutions | ||
| P.rho.Tx for gas mixtures, virial coefficients | ||
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| P.rho.Tx for liquid mixtures | ||
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| Densities and excess volumes of liquid mixtures | ||
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| Densities of solution, apparent and partial molar volumes | ||
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| Ultrasound velocity for liquid mixtures | ||
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TRANSPORT PROPERTIES
| Pure substances | ||
| Viscosity of saturated pure liquids | ||
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| Thermal conductivity of fluids | ||
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| Thermal conductivity of solids | ||
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| Mixtures and solutions | ||
| Viscosity of liquid mixtures | ||
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| Viscosity of supercritical fluid mixtures | ||
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| Diffusion coefficients in supercritical fluids | ||
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ELECTRICAL and MAGNETIC PROPERTIES
| Relative permittivity (dielectric constant) | ||
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Conductance of liquid mixtures |
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| Susceptance of liquid mixtures | ||
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| Electric inductance | ||
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| Electric conductivity in solutions | ||
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